SRX020699
DM embyro Stage 14 Digital DNase DS9477 replicate 1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
DNase-seq
Antigen
DNase-Seq

Cell type

Cell type Class
No description
Cell type
NA
NA
NA

Attributes by original data submitter

Sample

Sequenced DNA Library

library_name
DS9477_14_1
library_strategy
DNase-Hypersensitivity
library_source
GENOMIC
library_selection
DNase

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
29659866
Reads aligned (%)
47.9
Duplicates removed (%)
18.0
Number of peaks
7486 (qval < 1E-05)

dm3

Number of total reads
29659866
Reads aligned (%)
48.4
Duplicates removed (%)
14.0
Number of peaks
8042 (qval < 1E-05)

Base call quality data from DBCLS SRA