SRX020696
DM embyro Stage 10 Digital DNase DS8816 replicate 2

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
DNase-seq
Antigen
DNase-Seq

Cell type

Cell type Class
No description
Cell type
NA
NA
NA

Attributes by original data submitter

Sample

Sequenced DNA Library

library_name
DS8816_10_2
library_strategy
DNase-Hypersensitivity
library_source
GENOMIC
library_selection
DNase

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
38314538
Reads aligned (%)
36.6
Duplicates removed (%)
45.4
Number of peaks
7987 (qval < 1E-05)

dm3

Number of total reads
38314538
Reads aligned (%)
36.8
Duplicates removed (%)
40.5
Number of peaks
10983 (qval < 1E-05)

Base call quality data from DBCLS SRA