Sample information curated by ChIP-Atlas

Antigen

Antigen Class
RNA polymerase
Antigen
RNA polymerase II

Cell type

Cell type Class
Lung
Cell type
Lung
MeSH Description
Either of the pair of organs occupying the cavity of the thorax that effect the aeration of the blood.

Attributes by original data submitter

Sample

source_name
Adult_Tissue
tissue type
lung
strain
FVB
antibody
RNAP-II
antibody manufacturer
Abcam
antibody catalog number
ab5408

Sequenced DNA Library

library_name
GSM542589: lung_RNAP-II_ChIP-Seq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

mm10

Number of total reads
14674423
Reads aligned (%)
77.9
Duplicates removed (%)
13.2
Number of peaks
6500 (qval < 1E-05)

mm9

Number of total reads
14674423
Reads aligned (%)
77.8
Duplicates removed (%)
13.5
Number of peaks
6584 (qval < 1E-05)

Base call quality data from DBCLS SRA