Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
E2F4

Cell type

Cell type Class
Blood
Cell type
GM06990
Tissue
blood
Lineage
mesoderm
Description
B-lymphocyte, lymphoblastoid, International HapMap Project, CEPH/Utah, treatment: Epstein-Barr Virus transformed

Attributes by original data submitter

Sample

source_name
Peripheral vein
biomaterial_provider
GM06990
cell line
GM06990
cell type
Epstein-Barr Virus transformed lymphoblastoid
antibody
E2F4
antibody manufacturer
Santa Cruz Biotech
antibody catalog number
SC-1082X

Sequenced DNA Library

library_name
GSM537063: GM06990_E2F4_ChIP_seq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg19

Number of total reads
7240922
Reads aligned (%)
50.0
Duplicates removed (%)
4.6
Number of peaks
697 (qval < 1E-05)

hg38

Number of total reads
7240922
Reads aligned (%)
50.9
Duplicates removed (%)
4.3
Number of peaks
680 (qval < 1E-05)

Base call quality data from DBCLS SRA