Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Blood
Cell type
CD15 Granulocytes
NA
NA

Attributes by original data submitter

Sample

MOLECULE
genomic DNA
DISEASE
none
BIOMATERIAL_PROVIDER
FHCRC
BIOMATERIAL_TYPE
Primary Cell
CELL_TYPE
CD15 Primary Cells
MARKERS
CD15+
DONOR_ID
23.0
DONOR_AGE
NA
DONOR_HEALTH_STATUS
none
DONOR_SEX
male
DONOR_ETHNICITY
NA
PASSAGE_IF_EXPANDED
NA
sample_term_id
CL_0000775

Sequenced DNA Library

library_name
Solexa-16496
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

hg38

Number of total reads
12873320
Reads aligned (%)
93.6
Duplicates removed (%)
11.4
Number of peaks
291 (qval < 1E-05)

hg19

Number of total reads
12873320
Reads aligned (%)
93.3
Duplicates removed (%)
11.9
Number of peaks
285 (qval < 1E-05)

Base call quality data from DBCLS SRA