Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
PPARG

Cell type

Cell type Class
Adipocyte
Cell type
Adipose stromal cell
NA
NA

Attributes by original data submitter

Sample

source_name
hASC, ChIP
cell type
Adipose stromal cell (ASC) adipocyte
chip epitope
PPARG (81B1)
chip antibody
Cell Signaling Technologies, Cat# 2443, Lot# 5/29/2007

Sequenced DNA Library

library_name
GSM534494: hASC_t4_PpargAb2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg19

Number of total reads
43158521
Reads aligned (%)
17.2
Duplicates removed (%)
11.7
Number of peaks
9630 (qval < 1E-05)

hg38

Number of total reads
43158521
Reads aligned (%)
17.5
Duplicates removed (%)
10.9
Number of peaks
9679 (qval < 1E-05)

Base call quality data from DBCLS SRA