Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
PPARG

Cell type

Cell type Class
Adipocyte
Cell type
Adipose stromal cell
NA
NA

Attributes by original data submitter

Sample

source_name
hASC, ChIP
cell type
Adipose stromal cell (ASC) adipocyte
chip epitope
PPARG (H-100)
chip antibody
SCBT, Cat# SC-7196X, Lot# A0380

Sequenced DNA Library

library_name
GSM534493: hASC_t4_PpargAb1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg19

Number of total reads
34811424
Reads aligned (%)
30.7
Duplicates removed (%)
12.9
Number of peaks
16143 (qval < 1E-05)

hg38

Number of total reads
34811424
Reads aligned (%)
31.2
Duplicates removed (%)
12.1
Number of peaks
16234 (qval < 1E-05)

Base call quality data from DBCLS SRA