SRX019509
GSM534482: hASC t3 H3K27ac

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27ac

Cell type

Cell type Class
Adipocyte
Cell type
Adipose stromal cell
NA
NA

Attributes by original data submitter

Sample

source_name
hASC, ChIP
cell type
Adipose stromal cell (ASC) adipocyte
chip epitope
H3K27ac
chip antibody
Abcam, Cat# ab4729, Lot# 31456

Sequenced DNA Library

library_name
GSM534482: hASC_t3_H3K27ac
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
22163577
Reads aligned (%)
48.3
Duplicates removed (%)
4.4
Number of peaks
36058 (qval < 1E-05)

hg19

Number of total reads
22163577
Reads aligned (%)
48.1
Duplicates removed (%)
4.6
Number of peaks
35951 (qval < 1E-05)

Base call quality data from DBCLS SRA