SRX019358
GSM461263: Input ChIPSeq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

source_name
Embyonic stem cells
cell type
129SV embryonic stem cells
passages
13-18
chip antibody
none

Sequenced DNA Library

library_name
GSM461263: Input_ChIPSeq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
9083970
Reads aligned (%)
77.2
Duplicates removed (%)
14.5
Number of peaks
1692 (qval < 1E-05)

mm9

Number of total reads
9083970
Reads aligned (%)
77.1
Duplicates removed (%)
14.8
Number of peaks
1689 (qval < 1E-05)

Base call quality data from DBCLS SRA