SRX019005
GSM445807: Cord blood CD4+ Act+IL-4 4h

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Blood
Cell type
CD4+ T cells
NA
NA

Attributes by original data submitter

Sample

source_name
human cord blood CD4+ cell, activated and IL-4 treated, 4h
tissue
cord blood
cell type
CD4+ T cells

Sequenced DNA Library

library_name
GSM445807: Cord blood CD4+_Act+IL-4_4h
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
4416035
Reads aligned (%)
90.9
Duplicates removed (%)
25.4
Number of peaks
156 (qval < 1E-05)

hg19

Number of total reads
4416035
Reads aligned (%)
90.0
Duplicates removed (%)
26.2
Number of peaks
193 (qval < 1E-05)

Base call quality data from DBCLS SRA