SRX019004
GSM445806: Cord blood CD4+ Act 4h

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Blood
Cell type
CD4+ T cells
NA
NA

Attributes by original data submitter

Sample

source_name
human cord blood CD4+ cell, activated, 4h
tissue
cord blood
cell type
CD4+ T cells

Sequenced DNA Library

library_name
GSM445806: Cord blood CD4+_Act_4h
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
4009750
Reads aligned (%)
91.1
Duplicates removed (%)
10.5
Number of peaks
86 (qval < 1E-05)

hg19

Number of total reads
4009750
Reads aligned (%)
90.5
Duplicates removed (%)
10.9
Number of peaks
88 (qval < 1E-05)

Base call quality data from DBCLS SRA