Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27me3

Cell type

Cell type Class
Pluripotent stem cell
Cell type
hESC WIBR1
NA
NA

Attributes by original data submitter

Sample

source_name
hES line WIBR1 5% O2
cell line
hES cell line WIBR1
chip antibody
H3K27me3
oxygen concentration
5% O2

Sequenced DNA Library

library_name
GSM529414: H3K27me3 WIBR1 5% O2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg38

Number of total reads
6103443
Reads aligned (%)
27.4
Duplicates removed (%)
5.7
Number of peaks
457 (qval < 1E-05)

hg19

Number of total reads
6103443
Reads aligned (%)
27.3
Duplicates removed (%)
5.6
Number of peaks
460 (qval < 1E-05)

Base call quality data from DBCLS SRA