SRX018715
GSM499031: Input ChIPSeq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
38B9
NA
NA

Attributes by original data submitter

Sample

source_name
pre B-cells, input
cell line
38B9
cell type
A-MuLV pre B-cells
antibody
none

Sequenced DNA Library

library_name
GSM499031: Input_ChIPSeq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
35928180
Reads aligned (%)
94.3
Duplicates removed (%)
7.8
Number of peaks
849 (qval < 1E-05)

mm9

Number of total reads
35928180
Reads aligned (%)
94.2
Duplicates removed (%)
7.9
Number of peaks
946 (qval < 1E-05)

Base call quality data from DBCLS SRA