SRX018714
GSM499030: EBF1 ChIPSeq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Ebf1

Cell type

Cell type Class
Blood
Cell type
38B9
NA
NA

Attributes by original data submitter

Sample

source_name
pre B-cells, ChIP
cell line
38B9
cell type
A-MuLV pre B-cells
antibody
anti-EBF1b

Sequenced DNA Library

library_name
GSM499030: EBF1_ChIPSeq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
34893683
Reads aligned (%)
96.6
Duplicates removed (%)
7.3
Number of peaks
4374 (qval < 1E-05)

mm9

Number of total reads
34893683
Reads aligned (%)
96.4
Duplicates removed (%)
7.4
Number of peaks
4380 (qval < 1E-05)

Base call quality data from DBCLS SRA