SRX018503
GSM487697: Mitotic Input DNA

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Others
Cell type
T24
Primary Tissue
Urinary Bladder
Tissue Diagnosis
Carcinoma

Attributes by original data submitter

Sample

source_name
Mitotic T24 Cells
cell line
T24 bladder cancer cells
antibody
none
fraction
Input

Sequenced DNA Library

library_name
Mitotic Input DNA
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
14333252
Reads aligned (%)
55.4
Duplicates removed (%)
2.7
Number of peaks
533 (qval < 1E-05)

hg19

Number of total reads
14333252
Reads aligned (%)
54.7
Duplicates removed (%)
3.6
Number of peaks
768 (qval < 1E-05)

Base call quality data from DBCLS SRA