SRX018282
GSM525270: SRS009479.1 p300 T30-1.fq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
EP300

Cell type

Cell type Class
Neural
Cell type
T98G
Primary Tissue
Brain
Tissue Diagnosis
Glioblastoma

Attributes by original data submitter

Sample

source_name
Human glioblastoma T98G cells
time after stimulation
T30 (minutes)
cell line
T98G
antibody
p300

Sequenced DNA Library

library_name
SRS009479.1_p300_T30-1.fq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg19

Number of total reads
6446269
Reads aligned (%)
94.0
Duplicates removed (%)
2.9
Number of peaks
7280 (qval < 1E-05)

hg38

Number of total reads
6446269
Reads aligned (%)
94.6
Duplicates removed (%)
2.6
Number of peaks
7309 (qval < 1E-05)

Base call quality data from DBCLS SRA