Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Gata3

Cell type

Cell type Class
Blood
Cell type
Natural Killer T-Cells
MeSH Description
A specific natural killer T-cell subtype that expresses an invariant T-cell receptor alpha-chain.

Attributes by original data submitter

Sample

source_name
Natural Killer T cells
strain
C57BL/6
cell type
Natural Killer T cells
chip antibody
anti-Gata3 (558686, BD bioscience)

Sequenced DNA Library

library_name
NKT-Gata3 [ChIP-seq]
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

mm10

Number of total reads
7065631
Reads aligned (%)
87.0
Duplicates removed (%)
68.7
Number of peaks
1513 (qval < 1E-05)

mm9

Number of total reads
7065631
Reads aligned (%)
86.9
Duplicates removed (%)
69.1
Number of peaks
1533 (qval < 1E-05)

Base call quality data from DBCLS SRA