SRX018109
GSM523229: iTreg-Gata3 [ChIP-seq]

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Gata3

Cell type

Cell type Class
Blood
Cell type
T cells
NA
NA

Attributes by original data submitter

Sample

source_name
Inducible regulatory T cells
strain
C57BL/6
cell type
Inducible regulatory T cells
chip antibody
anti-Gata3 (558686, BD bioscience)

Sequenced DNA Library

library_name
iTreg-Gata3 [ChIP-seq]
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
10317238
Reads aligned (%)
88.4
Duplicates removed (%)
65.0
Number of peaks
771 (qval < 1E-05)

mm9

Number of total reads
10317238
Reads aligned (%)
88.3
Duplicates removed (%)
65.2
Number of peaks
795 (qval < 1E-05)

Base call quality data from DBCLS SRA