Antigen

Antigen Class

TFs and others

Antigen

Gata3

Cell type

Cell type Class

Blood

Cell type

Th17 Cells

MeSH Description

A subset of helper-effector T-lymphocytes which synthesize and secrete INTERLEUKINS IL-17; IL-17F; and IL-22. These cytokines are involved in host defenses and tissue inflammation in autoimmune diseases.

Sample

source_name

T-helper 17 cells

strain

C57BL/6

cell type

T-helper 17 cells

chip antibody

anti-Gata3 (558686, BD bioscience)

Sequenced DNA Library

library_name

Th17-Gata3 [ChIP-seq]

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

mm10

Number of total reads

7226595

Reads aligned (%)

88.6

Duplicates removed (%)

59.9

Number of peaks

504 (qval < 1E-05)

mm9

Number of total reads

7226595

Reads aligned (%)

88.5

Duplicates removed (%)

60.2

Number of peaks

510 (qval < 1E-05)