Antigen

Antigen Class

TFs and others

Antigen

Gata3

Cell type

Cell type Class

Blood

Cell type

Th1 Cells

MeSH Description

A subset of helper-inducer T-lymphocytes which synthesize and secrete INTERLEUKIN-2; INTERFERON-GAMMA; and INTERLEUKIN-12. Due to their ability to kill antigen-presenting cells and their lymphokine-mediated effector activity, Th1 cells are associated with vigorous delayed-type hypersensitivity reactions.

Sample

source_name

T-helper 1 cells

strain

C57BL/6

cell type

T-helper 1 cells

chip antibody

anti-Gata3 (558686, BD bioscience)

Sequenced DNA Library

library_name

Th1-Gata3 [ChIP-seq]

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

mm10

Number of total reads

8760638

Reads aligned (%)

89.3

Duplicates removed (%)

30.0

Number of peaks

769 (qval < 1E-05)

mm9

Number of total reads

8760638

Reads aligned (%)

89.2

Duplicates removed (%)

30.1

Number of peaks

763 (qval < 1E-05)