Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
GM18526
Tissue
blood
Lineage
mesoderm
Description
lymphoblastoid, International HapMap Project, Han Chinese in Beijing, China, treatment: Epstein-Barr Virus transformed

Attributes by original data submitter

Sample

source_name
Lymphoblastoid Cells
biomaterial_provider
GM18526
cell line
GM18526
cell type
Lymphoblastoid cell
chip antibody
normal mouse IgG

Sequenced DNA Library

library_name
GM18526_Pol_II_ChIPSeq_IgG_Rep3
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

hg38

Number of total reads
20956144
Reads aligned (%)
93.1
Duplicates removed (%)
2.9
Number of peaks
750 (qval < 1E-05)

hg19

Number of total reads
20956144
Reads aligned (%)
91.5
Duplicates removed (%)
3.5
Number of peaks
768 (qval < 1E-05)

Base call quality data from DBCLS SRA