Sample information curated by ChIP-Atlas

Antigen

Antigen Class
RNA polymerase
Antigen
RNA polymerase II

Cell type

Cell type Class
Blood
Cell type
GM18951
Tissue
blood
Lineage
mesoderm
Description
lymphoblastoid, International HapMap Project, Japanese in Tokyo, Japan, treatment: Epstein-Barr Virus transformed

Attributes by original data submitter

Sample

source_name
Lymphoblastoid Cells
biomaterial_provider
GM18951
cell line
GM18951
cell type
Lymphoblastoid cell
chip antibody
Pol II (8WG16)

Sequenced DNA Library

library_name
GM18951_Pol_II_ChIPSeq_Rep1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

hg38

Number of total reads
8729371
Reads aligned (%)
42.0
Duplicates removed (%)
11.6
Number of peaks
12577 (qval < 1E-05)

hg19

Number of total reads
8729371
Reads aligned (%)
41.5
Duplicates removed (%)
11.5
Number of peaks
12964 (qval < 1E-05)

Base call quality data from DBCLS SRA