Sample information curated by ChIP-Atlas

Antigen

Antigen Class
RNA polymerase
Antigen
RNA polymerase II

Cell type

Cell type Class
Blood
Cell type
GM18526
Tissue
blood
Lineage
mesoderm
Description
lymphoblastoid, International HapMap Project, Han Chinese in Beijing, China, treatment: Epstein-Barr Virus transformed

Attributes by original data submitter

Sample

source_name
Lymphoblastoid Cells
biomaterial_provider
GM18505
cell line
GM18505
cell type
Lymphoblastoid cell
chip antibody
Pol II (8WG16)

Sequenced DNA Library

library_name
GM18505_Pol_II_ChIPSeq_Rep1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

hg38

Number of total reads
19572908
Reads aligned (%)
54.6
Duplicates removed (%)
8.8
Number of peaks
15610 (qval < 1E-05)

hg19

Number of total reads
19572908
Reads aligned (%)
53.6
Duplicates removed (%)
8.7
Number of peaks
16151 (qval < 1E-05)

Base call quality data from DBCLS SRA