Antigen

Antigen Class

Input control

Antigen

Input control

Cell type

Cell type Class

Blood

Cell type

GM18951

Tissue

blood

Lineage

mesoderm

Description

lymphoblastoid, International HapMap Project, Japanese in Tokyo, Japan, treatment: Epstein-Barr Virus transformed

Sample

source_name

Lymphoblastoid Cells

biomaterial_provider

GM18951

cell line

GM18951

cell type

Lymphoblastoid cell

treatment

TNF-alpha induced (6h)

chip antibody

normal rabbit IgG

Sequenced DNA Library

library_name

GM18951_NFkB_II_ChIPSeq_IgG_Rep2

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

hg38

Number of total reads

5190141

Reads aligned (%)

92.9

Duplicates removed (%)

1.6

Number of peaks

57 (qval < 1E-05)

hg19

Number of total reads

5190141

Reads aligned (%)

91.5

Duplicates removed (%)

2.0

Number of peaks

76 (qval < 1E-05)