SRX017856
GSM480448: bam H3K36me3 ChIP-seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K36me3

Cell type

Cell type Class
Adult
Cell type
Testis
NA
NA

Attributes by original data submitter

Sample

source_name
bam testis
cell type
bam testis
antibody
H3K36me3
antibody manufacturer
Abcam
antibody catalog number
ab9050

Sequenced DNA Library

library_name
bam H3K36me3 ChIP-seq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
13531845
Reads aligned (%)
12.2
Duplicates removed (%)
27.8
Number of peaks
332 (qval < 1E-05)

dm3

Number of total reads
13531845
Reads aligned (%)
12.4
Duplicates removed (%)
27.3
Number of peaks
381 (qval < 1E-05)

Base call quality data from DBCLS SRA