SRX017851
GSM480158: S2 H3K36me3 ChIP-seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K36me3

Cell type

Cell type Class
Cell line
Cell type
S2
Source
Oregon R
Developmental Stage
late embryonic stage

Attributes by original data submitter

Sample

source_name
S2 cells
cell line
S2, ATCC, CLR-1963, Lot#5054622
antibody
H3K36me3
antibody manufacturer
Abcam
antibody catalog number
ab9050

Sequenced DNA Library

library_name
S2 H3K36me3 ChIP-seq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
9225154
Reads aligned (%)
29.8
Duplicates removed (%)
19.2
Number of peaks
849 (qval < 1E-05)

dm3

Number of total reads
9225154
Reads aligned (%)
29.8
Duplicates removed (%)
18.8
Number of peaks
1062 (qval < 1E-05)

Base call quality data from DBCLS SRA