Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
CD4+ T cells
NA
NA

Attributes by original data submitter

Sample

source_name
CD4+ T cell
cell type
CD4+ T cell
antibody
Rabbit IgG
sirna
n/a
treatment
n/a

Sequenced DNA Library

library_name
CD4-Rabbit-IgG
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg38

Number of total reads
10072810
Reads aligned (%)
73.3
Duplicates removed (%)
8.7
Number of peaks
56 (qval < 1E-05)

hg19

Number of total reads
10072810
Reads aligned (%)
72.8
Duplicates removed (%)
9.2
Number of peaks
75 (qval < 1E-05)

Base call quality data from DBCLS SRA