Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
HDAC2

Cell type

Cell type Class
Blood
Cell type
CD4+ T cells
NA
NA

Attributes by original data submitter

Sample

source_name
CD4+ T cell
cell type
CD4+ T cell
antibody
anti-HDAC2 Ab
sirna
n/a
treatment
n/a

Sequenced DNA Library

library_name
CD4-HDAC2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg19

Number of total reads
20385095
Reads aligned (%)
40.6
Duplicates removed (%)
29.7
Number of peaks
4156 (qval < 1E-05)

hg38

Number of total reads
20385095
Reads aligned (%)
41.5
Duplicates removed (%)
29.0
Number of peaks
214 (qval < 1E-05)

Base call quality data from DBCLS SRA