ChIP-Atlas: SRX017702

Sample information curated by ChIP-Atlas

Antigen

Antigen Class: TFs and others
Antigen: KAT5

Cell type

Cell type Class: Blood
Cell type: CD4+ T cells
NA: NA

Attributes by original data submitter

Sample

source_name: CD4+ T cell
cell type: CD4+ T cell
antibody: anti-Tip60 Ab
sirna: n/a
treatment: n/a

Sequenced DNA Library

library_name: CD4-Tip60
library_strategy: ChIP-Seq
library_source: GENOMIC
library_selection: ChIP

Sequencing Platform

instrument_model: Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg19

Number of total reads: 27893631
Reads aligned (%): 39.4
Duplicates removed (%): 11.7
Number of peaks: 347 (qval < 1E-05)

hg38

Number of total reads: 27893631
Reads aligned (%): 39.8
Duplicates removed (%): 10.1
Number of peaks: 417 (qval < 1E-05)

Base call quality data from DBCLS SRA