Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
POU5F1

Cell type

Cell type Class
Pluripotent stem cell
Cell type
hESC H1
NA
NA

Attributes by original data submitter

Sample

source_name
embryonic stem cells
antibody
OCT4
cell line
H1
cell type
embryonic stem cell
passages
28
antibody manufacturer
abcam (AB19857)

Sequenced DNA Library

library_name
OCT4
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg19

Number of total reads
12909881
Reads aligned (%)
78.7
Duplicates removed (%)
5.6
Number of peaks
3308 (qval < 1E-05)

hg38

Number of total reads
12909881
Reads aligned (%)
80.4
Duplicates removed (%)
4.6
Number of peaks
3305 (qval < 1E-05)

Base call quality data from DBCLS SRA