Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Blood
Cell type
Lymphoblastoid cells
NA
NA

Attributes by original data submitter

Sample

source_name
lymphoblastoid cells
biomaterial_provider
NA19240
individual
NA19240

Sequenced DNA Library

library_name
GM19240_CTCF_REP1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg38

Number of total reads
15633652
Reads aligned (%)
96.5
Duplicates removed (%)
23.3
Number of peaks
38658 (qval < 1E-05)

hg19

Number of total reads
15633652
Reads aligned (%)
94.5
Duplicates removed (%)
22.9
Number of peaks
39834 (qval < 1E-05)

Base call quality data from DBCLS SRA