Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Blood
Cell type
Lymphoblastoid cells
NA
NA

Attributes by original data submitter

Sample

source_name
lymphoblastoid cells
biomaterial_provider
NA12892
individual
NA12892

Sequenced DNA Library

library_name
GM12892_CTCF_REP1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg38

Number of total reads
27961092
Reads aligned (%)
96.1
Duplicates removed (%)
18.6
Number of peaks
43000 (qval < 1E-05)

hg19

Number of total reads
27961092
Reads aligned (%)
94.0
Duplicates removed (%)
17.8
Number of peaks
44411 (qval < 1E-05)

Base call quality data from DBCLS SRA