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For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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For hg19
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For hg38
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: TP73
wikigenes
PDBj
CellType: Saos-2
ATCC
MeSH
RIKEN BRC
Variation
TogoVar
SRX016977
GSM501689: TAp73beta ChIPSeq replicate1
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
TFs and others
Antigen
TP73
Cell type
Cell type Class
Bone
Cell type
Saos-2
Primary Tissue
Bone
Tissue Diagnosis
Osteosarcoma
Attributes by original data submitter
Sample
source_name
TAp73beta Saos-2 cell line
cell line
Saos-2
cell type
osteosarcoma
antibody
BL906 against p73
genetic modification
Tet-on TAp73beta
Sequenced DNA Library
library_name
TAp73beta_ChIPSeq_replicate1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
Sequencing Platform
instrument_model
Illumina Genome Analyzer
Where can I get the processing logs?
Read processing pipeline
log
hg19
Number of total reads
18189000
Reads aligned (%)
83.0
Duplicates removed (%)
14.8
Number of peaks
19236 (qval < 1E-05)
hg38
Number of total reads
18189000
Reads aligned (%)
84.4
Duplicates removed (%)
13.8
Number of peaks
19243 (qval < 1E-05)
Base call quality data from
DBCLS SRA