Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
BRF1

Cell type

Cell type Class
Lung
Cell type
IMR-90
Primary Tissue
Lung
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

source_name
IMR90hTert_Brf1
cell type
IMR90hTert
antibody
Brf1:CS146(#5)

Sequenced DNA Library

library_name
IMR90hTert_Brf1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

hg19

Number of total reads
25329442
Reads aligned (%)
49.0
Duplicates removed (%)
27.9
Number of peaks
1018 (qval < 1E-05)

hg38

Number of total reads
25329442
Reads aligned (%)
50.0
Duplicates removed (%)
27.0
Number of peaks
706 (qval < 1E-05)

Base call quality data from DBCLS SRA