SRX016170
GSM499661: w3L ChIPSeq 1, 2 and 3

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
GFP

Cell type

Cell type Class
Larvae
Cell type
3rd instar
NA
NA

Attributes by original data submitter

Sample

source_name
w3L_7TGFP_ChIPSeq_1, 2 and 3
development stage
3rdInstar-Larvae
antibody
goat anti GFP
test
ChIP

Sequenced DNA Library

library_name
w3L_ChIPSeq_1, 2 and 3
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
43362900
Reads aligned (%)
92.4
Duplicates removed (%)
36.9
Number of peaks
0 (qval < 1E-05)

dm3

Number of total reads
43362900
Reads aligned (%)
92.7
Duplicates removed (%)
35.5
Number of peaks
0 (qval < 1E-05)

Base call quality data from DBCLS SRA