SRX016163
GSM499654: WPP30-33 INPUT 1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Pupae
Cell type
White prepupae
NA
NA

Attributes by original data submitter

Sample

source_name
WPP30-33_EcRGFP_INPUT_1
development stage
WhitePrePupae30-33
reference
input

Sequenced DNA Library

library_name
WPP30-33_INPUT_1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
15285952
Reads aligned (%)
84.7
Duplicates removed (%)
7.3
Number of peaks
0 (qval < 1E-05)

dm3

Number of total reads
15285952
Reads aligned (%)
84.9
Duplicates removed (%)
6.6
Number of peaks
803 (qval < 1E-05)

Base call quality data from DBCLS SRA