ChIP-Atlas: SRX016159

Sample information curated by ChIP-Atlas

Antigen

Antigen Class: Input control
Antigen: Input control

Cell type

Cell type Class: Cell line
Cell type: S2
Source: Oregon R
Developmental Stage: late embryonic stage

Attributes by original data submitter

Sample

source_name: S2_CTCF200_INPUT_1
cell line: S2
reference: input

Sequenced DNA Library

library_name: S2_CTCF200_INPUT_1
library_strategy: ChIP-Seq
library_source: GENOMIC
library_selection: ChIP

Sequencing Platform

instrument_model: Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads: 8007425
Reads aligned (%): 92.3
Duplicates removed (%): 10.2
Number of peaks: 1267 (qval < 1E-05)

dm3

Number of total reads: 8007425
Reads aligned (%): 92.8
Duplicates removed (%): 8.4
Number of peaks: 0 (qval < 1E-05)

Base call quality data from DBCLS SRA