SRX016156
GSM499647: E4-8h 7T ChIPSeq 1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
GFP

Cell type

Cell type Class
Embryo
Cell type
4-8h embryos
NA
NA

Attributes by original data submitter

Sample

source_name
E4-8h_7T_ChIPSeq_1
development stage
E4-8h
antibody
goat anti GFP
test
ChIP

Sequenced DNA Library

library_name
E4-8h_7T_ChIPSeq_1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
14583545
Reads aligned (%)
96.1
Duplicates removed (%)
33.5
Number of peaks
2093 (qval < 1E-05)

dm3

Number of total reads
14583545
Reads aligned (%)
96.7
Duplicates removed (%)
31.7
Number of peaks
1072 (qval < 1E-05)

Base call quality data from DBCLS SRA