ChIP-Atlas: SRX016154

Sample information curated by ChIP-Atlas

Antigen

Antigen Class: Input control
Antigen: Input control

Cell type

Cell type Class: Embryo
Cell type: 0-4h embryos
NA: NA

Attributes by original data submitter

Sample

source_name: E0-4h_7T_INPUT_1
development stage: E0-4h
reference: input

Sequenced DNA Library

library_name: E0-4h_7T_INPUT_1
library_strategy: ChIP-Seq
library_source: GENOMIC
library_selection: ChIP

Sequencing Platform

instrument_model: Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads: 14662605
Reads aligned (%): 92.8
Duplicates removed (%): 20.1
Number of peaks: 2359 (qval < 1E-05)

dm3

Number of total reads: 14662605
Reads aligned (%): 93.6
Duplicates removed (%): 18.5
Number of peaks: 1321 (qval < 1E-05)

Base call quality data from DBCLS SRA