SRX016143
GSM499634: E0-12 HDAC-[492..501] INPUT 1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Embryo
Cell type
0-12h embryos
NA
NA

Attributes by original data submitter

Sample

source_name
E0-12_HDAC-[492..501]_INPUT_1
development stage
E0-12h
reference
input

Sequenced DNA Library

library_name
E0-12_HDAC-[492..501]_INPUT_1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
11863549
Reads aligned (%)
93.6
Duplicates removed (%)
11.1
Number of peaks
1449 (qval < 1E-05)

dm3

Number of total reads
11863549
Reads aligned (%)
94.1
Duplicates removed (%)
8.7
Number of peaks
1867 (qval < 1E-05)

Base call quality data from DBCLS SRA