SRX016034
GSM497495: Senescent cells p130 ChIP-seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
RBL2

Cell type

Cell type Class
Lung
Cell type
IMR-90
Primary Tissue
Lung
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

source_name
Chromatin IP against p130
chip antibody
p130
cell line
IMR90
growth state
Senescent

Sequenced DNA Library

library_name
Senescent cells p130 ChIP-seq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
9042855
Reads aligned (%)
56.3
Duplicates removed (%)
8.2
Number of peaks
6589 (qval < 1E-05)

hg19

Number of total reads
9042855
Reads aligned (%)
56.0
Duplicates removed (%)
8.8
Number of peaks
6697 (qval < 1E-05)

Base call quality data from DBCLS SRA