Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
RBL2

Cell type

Cell type Class
Lung
Cell type
IMR-90
Primary Tissue
Lung
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

source_name
Chromatin IP against p130
chip antibody
p130
cell line
IMR90
growth state
Quiescent

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg19

Number of total reads
8995714
Reads aligned (%)
58.9
Duplicates removed (%)
7.2
Number of peaks
5721 (qval < 1E-05)

hg38

Number of total reads
8995714
Reads aligned (%)
59.8
Duplicates removed (%)
6.4
Number of peaks
5551 (qval < 1E-05)

Base call quality data from DBCLS SRA