SRX015825
GSM449525: Jurkat ETS1 ChIPseq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
ETS1

Cell type

Cell type Class
Blood
Cell type
Jurkat (Clone E6-1)
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Acute Lymphocytic

Attributes by original data submitter

Sample

source_name
ETS1 ChIP
cell type
Jurkat, clone E6-1 T lymphocyte
antibody
ETS1 sc355 from Santa Cruz Biotechnology

Sequenced DNA Library

library_name
Jurkat_ETS1_ChIPseq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
17971377
Reads aligned (%)
52.9
Duplicates removed (%)
11.7
Number of peaks
9487 (qval < 1E-05)

hg19

Number of total reads
17971377
Reads aligned (%)
52.5
Duplicates removed (%)
12.9
Number of peaks
9481 (qval < 1E-05)

Base call quality data from DBCLS SRA