SRX015604
GSM494706: IRF4 bound post IL21 in IRF4 KO mice

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Irf4

Cell type

Cell type Class
Blood
Cell type
CD4+ T cells
NA
NA

Attributes by original data submitter

Sample

source_name
murine Irf4 deficient CD4+ T
antibody
IRF4
stimulation
post IL21
genotype/variation
IRF4 KO

Sequenced DNA Library

library_name
IRF4 bound post IL21 in IRF4 KO mice
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
22894590
Reads aligned (%)
36.0
Duplicates removed (%)
22.6
Number of peaks
654 (qval < 1E-05)

mm9

Number of total reads
22894590
Reads aligned (%)
35.9
Duplicates removed (%)
22.9
Number of peaks
737 (qval < 1E-05)

Base call quality data from DBCLS SRA