SRX015575
GSM494677: IRF4 bound pre IL21, seq 2

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Irf4

Cell type

Cell type Class
Blood
Cell type
CD4+ T cells
NA
NA

Attributes by original data submitter

Sample

source_name
murine CD4+ T
genotype/variation
wildtype
antibody
IRF4
stimulation
pre IL21

Sequenced DNA Library

library_name
IRF4 bound pre IL21, seq 2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
12547864
Reads aligned (%)
30.1
Duplicates removed (%)
9.1
Number of peaks
2188 (qval < 1E-05)

mm9

Number of total reads
12547864
Reads aligned (%)
30.1
Duplicates removed (%)
9.4
Number of peaks
2216 (qval < 1E-05)

Base call quality data from DBCLS SRA