SRX015142
GSM487427: K562 Myc ChIPSeq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
MYC

Cell type

Cell type Class
Blood
Cell type
K-562
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous

Attributes by original data submitter

Sample

source_name
K562
biomaterial_provider
cellBiology
growth properties
Suspension Morphology
lymphoblast antibody
Myc

Sequenced DNA Library

library_name
K562_Myc_ChIPSeq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg19

Number of total reads
11974409
Reads aligned (%)
85.3
Duplicates removed (%)
3.8
Number of peaks
13041 (qval < 1E-05)

hg38

Number of total reads
11974409
Reads aligned (%)
85.8
Duplicates removed (%)
3.2
Number of peaks
12953 (qval < 1E-05)

Base call quality data from DBCLS SRA