SRX015140
GSM487425: K562 Jun ChIPSeq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
JUN

Cell type

Cell type Class
Blood
Cell type
K-562
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous

Attributes by original data submitter

Sample

source_name
K562
biomaterial_provider
cellBiology
growth properties
Suspension Morphology
lymphoblast antibody
Jun

Sequenced DNA Library

library_name
K562_Jun_ChIPSeq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
21366481
Reads aligned (%)
80.3
Duplicates removed (%)
7.8
Number of peaks
22380 (qval < 1E-05)

hg19

Number of total reads
21366481
Reads aligned (%)
79.9
Duplicates removed (%)
8.4
Number of peaks
22505 (qval < 1E-05)

Base call quality data from DBCLS SRA