Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27me3

Cell type

Cell type Class
Blood
Cell type
UPR9
NA
NA

Attributes by original data submitter

Sample

source_name
UPR9 cells
agent
none
antibody
H3K27me3

Sequenced DNA Library

library_name
H3K27me3_ChIPseq_UPR9_noZinc_JM38
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg38

Number of total reads
6629981
Reads aligned (%)
85.7
Duplicates removed (%)
6.4
Number of peaks
40 (qval < 1E-05)

hg19

Number of total reads
6629981
Reads aligned (%)
85.0
Duplicates removed (%)
6.6
Number of peaks
32 (qval < 1E-05)

Base call quality data from DBCLS SRA