SRX014786
GSM468216: H3K9K14ac ChIPseq UPR9 5hrZinc JM37

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K9K14ac

Cell type

Cell type Class
Blood
Cell type
UPR9
NA
NA

Attributes by original data submitter

Sample

source_name
UPR9 cells
agent
5 hours zinc
antibody
H3K9K14ac

Sequenced DNA Library

library_name
H3K9K14ac_ChIPseq_UPR9_5hrZinc_JM37
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
14799559
Reads aligned (%)
97.7
Duplicates removed (%)
13.8
Number of peaks
35317 (qval < 1E-05)

hg19

Number of total reads
14799559
Reads aligned (%)
97.4
Duplicates removed (%)
13.9
Number of peaks
35221 (qval < 1E-05)

Base call quality data from DBCLS SRA