Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
RXRA

Cell type

Cell type Class
Blood
Cell type
UPR9
NA
NA

Attributes by original data submitter

Sample

source_name
UPR9 cells
agent
5 hours zinc
antibody
RXR

Sequenced DNA Library

library_name
RXR_ChIPseq_UPR9_5hrZinc_JM35
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg19

Number of total reads
7497579
Reads aligned (%)
85.7
Duplicates removed (%)
5.4
Number of peaks
6932 (qval < 1E-05)

hg38

Number of total reads
7497579
Reads aligned (%)
87.2
Duplicates removed (%)
4.5
Number of peaks
6749 (qval < 1E-05)

Base call quality data from DBCLS SRA